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New search| # | Database | Reference genome | ANI (%) | AF query (%) | AF ref (%) | Taxonomy (reference) |
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About
- Your genome is compared with skani against two databases: Microbiome Datahub MAGs (species representatives, dereplicated at 95% ANI with dRep; taxonomy from GTDB-Tk) and NCBI RefSeq reference genomes of Bacteria and Archaea (GTDB taxonomy where available, otherwise the NCBI organism name). type marks assemblies from type material.
- species = ANI ≥ 95% and max(AF query, AF ref) ≥ 50%. Low AF can mean an incomplete or contaminated MAG.
- skani reports ANI only above about 80%. If there are no hits, no reference in the database is from the same genus.
- Uploaded sequences are deleted as soon as the search finishes. Results are kept for 7 days and can be opened by anyone who has the link.